Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948772.1_cds_XP_016489942.1_80414
CDS Infomation

[gene=LOC107809767] [db_xref=GeneID:107809767] [protein=dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like] [protein_id=XP_016489942.1] [location=join(11782..12069,12905..13168,13282..13452,14338..14450,14543..14729,15018..15127,15547..15703)] [gbkey=CDS]
Sequence

ATGGCATCACTTGGGTTGGCTCAACGAATTAGAATTGGACTTGATGGTAACTCGGGTGCT
GAATTCCCTATGATGGGTCGGCCCCGTAGGTCCTTGAGCTCGAATTACGGTAGAAACCGA
GTTGGGTTCAGAATTATGGCCTCAGCTGTGGAGCCCGATCTCAGCGTCACTGTTAACGGT
TTGAAAATGCCCAACCCATTCGTTATCGGGTCGGGTCCTCCTGGGACCAACTATACTGTG
ATGAAAAGAGCCTTTGATGAAGGCTGGGGTGGTGTTATCGCCAAAACGGTGTCTTTGGAA
GCCGATAAAGTTAAAAATGTGACCCCAAGATATGCTAAATTAAGAGCAGGATCAAATGGT
TCTGCCAAAGGACAAATTATCGGGTGGCAGAATATTGAGCTCATAAGTGATCGACCTCTT
GAAACAATGCTGAAAGAGTTTAGGCAATTGAAAGAAGAGTATCCGGATAGGATACTTATT
GCTTCTATCATGGAAGAGTACAACAAAGCTGCTTGGGAGGAACTTATTTACAAAGTTGAG
GAAACTGGAATTGATGCCATTGAGATCAACTTCTCATGCCCTCATGGTATGCCAGAACGT
AGAATGGGTGCTGCTGTTGGTCAAGATTGCGATCTCTTGGAGGAGGTTTGTGGCTGGATT
AATGCTGTAGCCACAGTTCCAGTTTGGGCAAAGATGACCCCTAATATCACCGACATTACA
AAGCCGGCTAGGGTGTCTCTTAACCAAGGGTGCGAGGGAGTATCTGCCATAAATACAATC
ATGAGTGTTATGGGAATCAATCTTAACACCTTAAGGCCCGAGCCTTGTGTTGAGGGATAC
TCAACTCCTGGAGGCTACTCAGCAAAGGCAGTGCACCCGATTGCTCTTGCAAAAGTAATG
AACATTGCACAGATGATGAAGTCAGAATTTGGAGATAAGGACTATTCACTCTCTGCTATT
GGGGGAGTCGAGACAGGTGGTGATGCTGCTGAGTTTATTCTTCTCGGAGCAAATACTGTA
CAGGTTTGTACCGGTGTCATGATGCATGGATATGGACTTGTGAAAACGTTGTGCTCTGAG
CTGAAAGATTTCATGAGAAAGCACAATTTTTCGTCAATAGAAGATTTTAGGGGGTCGTCA
CTTGAGTACTTCACAACCCACACGGATTTGGTTAAAAGGCAACAAGAAGCAATACGCCAA
AGGAAAGCCATTAAGAAAGGTTTACAATCAGACAAAGACTGGACAGGAGATGGTTTTGTG
CAAGAAACTGAAAGCATGGTTTCCAACTAG

Peptide Sequence

PEP ID

XP_016489942.1
PEP Infomation

PREDICTED: dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [Nicotiana tabacum]
Sequence

MASLGLAQRIRIGLDGNSGAEFPMMGRPRRSLSSNYGRNRVGFRIMASAVEPDLSVTVNG
LKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLEADKVKNVTPRYAKLRAGSNG
SAKGQIIGWQNIELISDRPLETMLKEFRQLKEEYPDRILIASIMEEYNKAAWEELIYKVE
ETGIDAIEINFSCPHGMPERRMGAAVGQDCDLLEEVCGWINAVATVPVWAKMTPNITDIT
KPARVSLNQGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPIALAKVM
NIAQMMKSEFGDKDYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKTLCSE
LKDFMRKHNFSSIEDFRGSSLEYFTTHTDLVKRQQEAIRQRKAIKKGLQSDKDWTGDGFV
QETESMVSN

Transcript Sequence

Gene sequence data has not been registered.